Manual Oil Spill Impacts: Taxonomic and Ontological Approaches

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Taxonomic and Ontological Approaches, 1st Edition

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Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis

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Publication details

Eisen J. Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes. Moran MA. Metatranscriptomics: eavesdropping on complex microbial communities. Analysis of microbial gene transcripts in environmental samples.

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Application of metatranscriptomics to soil environments. J Microbiol Methods. Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities. A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine micro-biota datasets. Functional signatures of oral dysbiosis during periodontitis progression revealed by microbial metatranscriptome analysis.

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Does Oil Spill Damage Last Forever?

De novo transcript sequence reconstruction from RNA-seq using the trinity platform for reference generation and analysis. Nat Protoc. Optimal spliced alignments of short sequence reads.

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Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous genlisea species. Front Microbiol. Microb Inform Exp.